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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903399.1_cds_XP_016453439.1_47566
CDS Infomation

[gene=LOC107777805] [db_xref=GeneID:107777805] [protein=putative E3 ubiquitin-protein ligase XBAT35 isoform X1] [protein_id=XP_016453439.1] [location=join(22095..22196,22973..23087,24364..24444,24540..24628,24741..24832,25159..25240,25729..25831,25922..25996,27485..27570,27774..28457)] [gbkey=CDS]
Sequence

ATGGGGCAGCAGCAATCGAAAGACGAGCTTCTGTATCAGCAAGTAAATTATGGAAATATC
GAAGGCATCAAATCTCTTCACCGTGAAGGCGCTGCCCTTGAGTGGATGGATAAGGAAGGG
AAGACACCGTTAATTGTGGCGTGCATGAATCCCGAGCTATACAATGTCGCAAAAACTTTG
ATAGAATTGGGTGCCAATGTCAATGCTTACCGTCCAGGTCGTCATGCGGGGACTCCTCTA
CATCATGCAGCAAAAAGAGGTCTTGAGCAGACAGTGAAGTTACTCCTTTCACATGGAGCA
AATGCATTGATAATGAATGATGACTGCCAAACGCCACTTGATGTTGCTAGAATTAAAGGT
TTCAGCAATGTTGTCCGTGCAATTGAGAACCATATTTGCTTATTTTCTGGTTGGCTGCGG
GAATTTTACGGGCCTGGATTTCTTGAACTGTTCGCACCACAGTTGCTTAGCCGGAAAGTC
TGGGTGGTTGTCTTACCATGCGGTTCCCGTAATCTCAGAAAGCCTTTCAAGTTGGAGCTT
GCTATATATTCAGCTGTCCAGGATGCTCAGCCCCGCACAATAGTTGCACTGTGGAAGGCC
AATATGGAAGAACCAAATTTCAGCCAGCCTGATCCAGCAGTTATCATATCCGATATTTCA
AACATCCCGAGGCGCTGGAGGCGAAGGCGAGGGATAATGCCCTCCCAAGGGATAAGGAAT
AGACCCCGAGGAGCTAGGCAAACAAGGATTAAACTTACAGCTGTCCAGGAAAGCGAAAAG
CAGCAATTGCAGTCTTTCTGCAATGCATGCAAGGGAATTCCTCAGGTCATGCATCTAGCA
TTTCCTTTCAGATCTCAGACTCCTGCGGTCCCTGCAACTGCTCCTTCAACCACAGAGGAT
GTGGAATTAGCAATGGCAATTAGTGCCTCTCTTCAGTCCGCTTCACAACAAAGACCAACC
TATCATGAGAATCACCCAGGATCAGGAACAGAAACATCAATGAATCGGATTAACCCTGTT
GAGATTGTCAGTCATAGTGATAGCTCTTTTACAGGGGCCTCTTACCAAAAAGCTAGTAGT
AGTGGCTGTCAAGTTGAGGAAGCCAGTTCAAGTGGCACTCAAGTTGAGCAAGTCCACACT
TCTAGTGATACGTCTACTGTTGTCGAAGCAATGCAAGAGAATCCGGTTACTGAATCTGTC
CCAACAGCTCCTCCTCTTACGGATGAAGTTATAGAGAATGGGCCAATTCACTATCCATCG
ATCGACGCCAGCCCAGTTGACTTGTCTTCTCCAACTATTGAGAACTCCGGAGCACACGAA
AGCGGTAATCCTGATGGTGCTTCTTCATCGTGTATAATATGTTTAGATGCTCCAGTGGAA
GGAGCCTGCATCCCTTGTGGCCACATGGCTGGATGCATGTCTTGTTTGAATGAGATTAAA
GGAAAGAAGTGGGGCTGCCCCGTCTGTCGTGCCAAGATAGATCAGGTGATAAGGTTGTAT
GCTGTTTAA

Peptide Sequence

PEP ID

XP_016453439.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 isoform X1 [Nicotiana tabacum]
Sequence

MGQQQSKDELLYQQVNYGNIEGIKSLHREGAALEWMDKEGKTPLIVACMNPELYNVAKTL
IELGANVNAYRPGRHAGTPLHHAAKRGLEQTVKLLLSHGANALIMNDDCQTPLDVARIKG
FSNVVRAIENHICLFSGWLREFYGPGFLELFAPQLLSRKVWVVVLPCGSRNLRKPFKLEL
AIYSAVQDAQPRTIVALWKANMEEPNFSQPDPAVIISDISNIPRRWRRRRGIMPSQGIRN
RPRGARQTRIKLTAVQESEKQQLQSFCNACKGIPQVMHLAFPFRSQTPAVPATAPSTTED
VELAMAISASLQSASQQRPTYHENHPGSGTETSMNRINPVEIVSHSDSSFTGASYQKASS
SGCQVEEASSSGTQVEQVHTSSDTSTVVEAMQENPVTESVPTAPPLTDEVIENGPIHYPS
IDASPVDLSSPTIENSGAHESGNPDGASSSCIICLDAPVEGACIPCGHMAGCMSCLNEIK
GKKWGCPVCRAKIDQVIRLYAV

Transcript Sequence

Gene sequence data has not been registered.